BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F07LP1|AL426395
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1492 1557 0.0
>3x_Contig1492
Length = 8701
Score = 1557 bits (784), Expect = 0.0
Identities = 803/808 (99%), Gaps = 2/808 (0%)
Strand = Plus / Plus
Query: 1 tggttgagcttgagcagccaacttgktgc-agttggtaaagaaccaatcaaagagtcgtt 59
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 4866 tggttgagcttgagcagccaacttggagccagttggtaaagaaccaatcaaagagtcgtt 4925
Query: 60 gacaaatctcttcaagtcagcttcgttgacaccttgaccaacaatttcaatgttttcctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4926 gacaaatctcttcaagtcagcttcgttgacaccttgaccaacaatttcaatgttttcctt 4985
Query: 120 ggtgtagaccttgttggcataagccttgatatcatccaaggtgaccttctcgacacctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4986 ggtgtagaccttgttggcataagccttgatatcatccaaggtgaccttctcgacacctct 5045
Query: 180 gtatagaactgtgttacctaagtcctttctgaaagagacattgtaaagtaagtyttcggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5046 gtatagaactgtgttacctaagtcctttctgaaagagacattgtaaagtaagtcttcggc 5105
Query: 240 cttgttgattgggttagtttcagaaacggaaatgtcgtacttagcagctggcaagacaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5106 cttgttgattgggttagtttcagaaacggaaatgtcgtacttagcagctggcaagacaga 5165
Query: 300 ttctggtaattcgtggggtctgaaactggtcttgtacaaaacgttaccc-aaagcgttaa 358
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5166 ttctggtaattcgtggggtctgaaactggtcttgtacaaaacgttaccccaaagcgttaa 5225
Query: 359 cgaagtatggaagatcttccttcaagaaagtagccttcaaagtgatgtattctctgtcaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5226 cgaagtatggaagatcttccttcaagaaagtagccttcaaagtgatgtattctctgtcaa 5285
Query: 419 cactggattcgaacttaccacccaacaattcactttctctaaccaatctcaaagcagact 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5286 cactggattcgaacttaccacccaacaattcactttctctaaccaatctcaaagcagact 5345
Query: 479 tgttaccggtgttatggaagttgaatctggacaaaaggtgggcaataccttctttgtcgg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5346 tgttaccggtgttatggaagttgaatctggacaaaaggtgggcaataccttctttgtcgg 5405
Query: 539 cgtaacgagaaccaccgtgaaccttaacagccaaagtggatagtttaccggaaccgtctt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5406 cgtaacgagaaccaccgtgaaccttaacagccaaagtggatagtttaccggaaccgtctt 5465
Query: 599 tagcggaaatactgaattttctagcagtttgctgggcaaattgtaatctactggacaaca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5466 tagcggaaatactgaattttctagcagtttgctgggcaaattgtaatctactggacaaca 5525
Query: 659 tctttatattatatgtttatgggctttttaattttgggagtcagaatatcaatcaatatc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5526 tctttatattatatgtttatgggctttttaattttgggagtcagaatatcaatcaatatc 5585
Query: 719 aatatcaattatgcgttaatcaaaaggtcttcctctacttttcctttaatgtccaaactc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5586 aatatcaattatgcgttaatcaaaaggtcttcctctacttttcctttaatgtccaaactc 5645
Query: 779 aaataatatttactcacacacaaaataa 806
||||||||||||||||||||||||||||
Sbjct: 5646 aaataatatttactcacacacaaaataa 5673
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6421
Number of Sequences: 1807
Number of extensions: 6421
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)